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Series GSE12885 Query DataSets for GSE12885
Status Public on Sep 08, 2009
Title Genome-wide changes in DNA methylation and copy number play a role in deregulation of gene expression in osteosarcoma
Organism Homo sapiens
Experiment type Expression profiling by array
Genome variation profiling by genome tiling array
Methylation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 19286668
Submission date Sep 22, 2008
Last update date Jul 26, 2018
Contact name Bekim Sadikovic
E-mail(s) bsadikov@gmail.com
Organization name The SickKids Hospital and Princess Margaret Hospital
Street address 555 University Avenue
City Toronto
State/province Ontario
ZIP/Postal code M5G 1X8
Country Canada
 
Platforms (4)
GPL4091 Agilent-014693 Human Genome CGH Microarray 244A (Feature number version)
GPL5082 [Hs_PromPR] Affymetrix Human Promoter 1.0R Array
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (58)
GSM288001 HOB IP1
GSM288002 HOB IP2
GSM288003 HOB IN1
This SuperSeries is composed of the following SubSeries:
GSE12830 Osteosarcoma Copy Number Analysis
GSE12864 Me-DIP-chip data from osteosarcoma tumours
GSE12865 Gene expression of human paediatric osteosarcoma tumour samples relative to normal human osteoblasts
Relations
BioProject PRJNA110875

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12885_RAW.tar 976.2 Mb (http)(custom) TAR (of CEL, CHP, TXT)
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record
Raw data provided as supplementary file

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