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Series GSE128872 Query DataSets for GSE128872
Status Public on Jul 05, 2019
Title Gene responses to LKB1 overexpression in NSCLC cell line A549
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Differential gene expression analysis of LKB1-deficient and LKB1-reconstituted A549 NSCLC cells
 
Overall design RNA from A549 cells expressing the pBabe vector or full length LKB1 was isolated and RNA-seq was performed.
 
Contributor(s) Rodón L, Svensson RU, Wiater E, Chun MH, Tsai W, Eichner LJ, Shaw RJ, Montminy M
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Submission date Mar 26, 2019
Last update date Jul 05, 2019
Contact name Ezra Wiater
E-mail(s) wiater@salk.edu
Phone (858)453-4100
Organization name Salk Institute For Biological Studies
Department PBL
Lab Montminy
Street address 10010 N Torrey Pines Rd
City San Diego
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (2)
GSM3687834 RNA-Seq A549 p-Babe
GSM3687835 RNA-Seq A549 p-Babe LKB1
This SubSeries is part of SuperSeries:
GSE128873 LKB1-deficient and LKB1-reconstituted A549 NSCLC cells
Relations
BioProject PRJNA529196
SRA SRP189475

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128872_A549-control_LKB1.gene_exp.diff.gz 701.7 Kb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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