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| Status |
Public on Apr 13, 2019 |
| Title |
RNA SEQ NTHi modA18 |
| Organism |
Haemophilus influenzae |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Comparison of RNA expression profiles from NTHi strain 84P36H1 strains expressing methyltransferase ModA18 (ON) or not (OFF).
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| Overall design |
RNA isolated from triplicate cultures of each strain (modA18 ON and modA18 OFF) grown in sBHI to mid-log; comparison of gene expression profiles by comparing modA18ON vs. modA18 OFF to determine differential gene expression influenced by ModA18 methylation differences.
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| Contributor(s) |
Atack JM, Jennings MP |
| Citation(s) |
31320413 |
| Submission date |
Apr 12, 2019 |
| Last update date |
Aug 20, 2019 |
| Contact name |
John Michael Atack |
| E-mail(s) |
j.atack@griffith.edu.au
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| Organization name |
Griffith University
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| Department |
Institute for Glycomics
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| Street address |
Gold Coast Campus
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| City |
Gold Coast |
| State/province |
QLD |
| ZIP/Postal code |
4215 |
| Country |
Australia |
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| Platforms (1) |
| GPL25730 |
Illumina NovaSeq 6000 (Haemophilus influenzae) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA532651 |
| SRA |
SRP192466 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE129764_modA18_C_ON.VS.OFF-all_genes.txt.gz |
96.6 Kb |
(ftp)(http) |
TXT |
| GSE129764_modA18_gene_counts.txt.gz |
28.7 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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