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Series GSE12978 Query DataSets for GSE12978
Status Public on Oct 01, 2008
Title Microarray Analysis of the transcriptome of the Subfornical Organ in the rat
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary In these studies we have for the first time described the transcriptome of the rat SFO, and have in addition identified genes the expression of which is significantly modified by either water or food deprivation.
 
Overall design For each condition (food deprivation, water deprivation, untreated), 25 animals were denied food for 48 hours prior to sacrifice. The Subfornical organ was removed under a dissecting microscope from a 1mm slice of brain removed from an ice cold brain matrix. SFO's from 5 animals were pooled for each sample prior to RNA extraction to give n=5.
 
Contributor(s) Hindmarch CC, Fry M, Yao S, Smith PM, Ferguson AV
Citation(s) 18832082, 26227400
Submission date Sep 30, 2008
Last update date May 29, 2020
Contact name DAVID MURPHY
Organization name University of Bristol
Department Medicine and Dentistry
Lab Laboratories for Integrative Neuroscience and Endocrinolgy
Street address Whitson Street
City Bristol
State/province AVON
ZIP/Postal code BS1 3NY
Country United Kingdom
 
Platforms (1)
GPL1355 [Rat230_2] Affymetrix Rat Genome 230 2.0 Array
Samples (15)
GSM325351 SFO Food deprivation 1
GSM325352 SFO Food deprivation 2
GSM325353 SFO Food deprivation 3
Relations
BioProject PRJNA112589

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12978_RAW.tar 42.7 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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