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GEO accession:
Series GSE130914
Query DataSets for GSE130914
Status
Public on Oct 27, 2021
Title
Harnessing natural variation to identify cis regulators of sex-biased gene expression in a multi-strain mouse liver model
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34752452
NIH grant(s)
Grant ID
Grant title
Affiliation
Name
R01 DK121998
Growth Hormone Regulation of Sex Differences in Liver Metabolism
BOSTON UNIVERSITY CHARLES RIVER CAMPUS
DAVID J WAXMAN
Submission date
May 08, 2019
Last update date
Nov 12, 2021
Contact name
David J. Waxman
E-mail(s)
djw@bu.edu
Organization name
Boston University
Department
Department of Biology and Bioinformatics Program
Street address
5 Cummington Mall
City
Boston
State/province
MA
ZIP/Postal code
02215
Country
USA
Platforms (1)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
Samples (60)
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GSM3756034
Male_B6_H3K27ac_Repl1_G162_M1
GSM3756035
Male_B6_H3K27ac_Repl2_G162_M2
GSM3756036
Male_B6_H3K27ac_Repl3_G162_M3
GSM3756037
Male_B6_H3K27ac_Repl4_G162_M4
GSM3756038
Male_B6_H3K27ac_Repl5_G162_M5
GSM3756039
Female_B6_H3K27ac_Repl1_G162_M6
GSM3756040
Female_B6_H3K27ac_Repl2_G162_M7
GSM3756041
Female_B6_H3K27ac_Repl3_G162_M8
GSM3756042
Female_B6_H3K27ac_Repl4_G162_M9
GSM3756043
Female_B6_H3K27ac_Repl5_G162_M10
GSM3756044
Male_CAST_H3K27ac_Repl1_G162_M11
GSM3756045
Male_CAST_H3K27ac_Repl2_G162_M12
GSM3756046
Male_CAST_H3K27ac_Repl3_G162_M13
GSM3756047
Male_CAST_H3K27ac_Repl4_G162_M14
GSM3756048
Male_CAST_H3K27ac_Repl5_G162_M15
GSM3756049
Female_CAST_H3K27ac_Repl1_G162_M16
GSM3756050
Female_CAST_H3K27ac_Repl2_G162_M17
GSM3756051
Female_CAST_H3K27ac_Repl3_G162_M18
GSM3756052
Female_CAST_H3K27ac_Repl4_G162_M19
GSM3756053
Female_CAST_H3K27ac_Repl5_G162_M20
GSM3756054
Male_B6_INPUT_G162_M21
GSM3756055
Female_B6_INPUT_G162_M22
GSM3756056
Male_CAST_INPUT_G162_M23
GSM3756057
Female_CAST_INPUT_G162_M24
GSM3756100
Male_B6_DNaseI_Repl1_G163_M1
GSM3756101
Male_B6_DNaseI_Repl2_G163_M2
GSM3756102
Male_B6_DNaseI_Repl3_G163_M3
GSM3756103
Male_B6_DNaseI_Repl4_G163_M4
GSM3756104
Female_B6_DNaseI_Repl1_G163_M6
GSM3756105
Female_B6_DNaseI_Repl2_G163_M7
GSM3756106
Female_B6_DNaseI_Repl3_G163_M9
GSM3756107
Female_B6_DNaseI_Repl4_G163_M10
GSM3756108
Male_CAST_DNaseI_Repl1_G163_M11
GSM3756109
Male_CAST_DNaseI_Repl2_G163_M13
GSM3756110
Male_CAST_DNaseI_Repl3_G163_M14
GSM3756111
Male_CAST_DNaseI_Repl4_G163_M15
GSM3756112
Female_CAST_DNaseI_Repl1_G163_M16
GSM3756113
Female_CAST_DNaseI_Repl2_G163_M17
GSM3756114
Female_CAST_DNaseI_Repl3_G163_M18
GSM3756115
Female_CAST_DNaseI_Repl4_G163_M19
GSM3756116
Male_B6_PolyA_RNA_Repl1_G164_M1
GSM3756117
Male_B6_PolyA_RNA_Repl2_G164_M2
GSM3756118
Male_B6_PolyA_RNA_Repl3_G164_M3
GSM3756119
Male_B6_PolyA_RNA_Repl4_G164_M4
GSM3756120
Male_B6_PolyA_RNA_Repl5_G164_M5
GSM3756121
Female_B6_PolyA_RNA_Repl1_G164_M6
GSM3756122
Female_B6_PolyA_RNA_Repl2_G164_M7
GSM3756123
Female_B6_PolyA_RNA_Repl3_G164_M8
GSM3756124
Female_B6_PolyA_RNA_Repl4_G164_M9
GSM3756125
Female_B6_PolyA_RNA_Repl5_G164_M10
GSM3756126
Male_CAST_PolyA_RNA_Repl1_G164_M11
GSM3756127
Male_CAST_PolyA_RNA_Repl2_G164_M12
GSM3756128
Male_CAST_PolyA_RNA_Repl3_G164_M13
GSM3756129
Male_CAST_PolyA_RNA_Repl4_G164_M14
GSM3756130
Male_CAST_PolyA_RNA_Repl5_G164_M15
GSM3756131
Female_CAST_PolyA_RNA_Repl1_G164_M16
GSM3756132
Female_CAST_PolyA_RNA_Repl2_G164_M17
GSM3756133
Female_CAST_PolyA_RNA_Repl3_G164_M18
GSM3756134
Female_CAST_PolyA_RNA_Repl4_G164_M19
GSM3756135
Female_CAST_PolyA_RNA_Repl5_G164_M20
This SuperSeries is composed of the following SubSeries:
GSE130909
Mouse liver H3K27ac histone marks in male and female mouse liver for two mouse strains: C57BL/6J and CAST/EiJ.
GSE130912
Mouse liver DNase-seq identification of DNase hypersensitive sites (DHS) in male and female mouse liver for two mouse strains: C57BL/6J and CAST/EiJ.
GSE130913
RNA-seq in male and female mouse liver for two mouse strains: C57BL/6J and CAST/EiJ.
Relations
BioProject
PRJNA542063
Download family
Format
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TXT
Supplementary data files not provided
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