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Series GSE130921 Query DataSets for GSE130921
Status Public on Mar 30, 2020
Title Gene expression analysis of MTBTOM tumors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Tumors that overexpress the MYC oncogene frequently demonstrate aneuploidy, numerical chromosome alterations associated with highly aggressive cancers, rapid tumor evolution, and poor patient outcome. Here, we identify that MYC overexpression induces defects in microtubule nucleation and mitotic spindle assembly, promoting chromosome segregation defects, micronuclei and chromosomal instability (CIN). High TPX2 expression is permissive for mitotic spindle assembly and chromosome segregation in cells with MYC overexpression; whereas TPX2 depletion blocks mitotic progression, induces cell death and prevents tumor growth. Attenuating MYC expression reverses mitotic defects, even in established tumor cell lines, implicating an ongoing role for high MYC in the persistence of CIN in tumors. Our studies implicate the MYC oncogene as a regulator of spindle assembly and identify a new MYC-TPX2 synthetic-lethal interaction that could represent a future therapeutic strategy in MYC-overexpressing cancers. Moreover, our studies suggest that blocking MYC activity can attenuate the emergence of CIN and tumor evolution.
 
Overall design MTB-TOM (MMTV-rtTA/TetO-MYC) mice were bred and maintained off of doxycycline. At 12-15 weeks of age, female mice were put on doxycycline to induce MYC expression and tumorigenesis. Tumors at 1 cm at any single dimension were flash frozen in liquid nitrogen. Mice were put off doxycycline when tumors reached 1 cm for three days to switch off MYC expression (regressed tumor). Mammary glands from mice that were never on doxycycline were taken as control tissue.
 
Contributor(s) Rohrberg J, Balakrishnan S, Zhou A, Goga A
Citation(s) 32160543, 35760778
Submission date May 08, 2019
Last update date Jul 07, 2022
Contact name Andrei Goga
E-mail(s) andrei.goga@ucsf.edu
Organization name UCSF
Department Cell & Tissue Biology
Lab Goga Lab
Street address 513 Parnassus Ave
City San Francisco
State/province CA
ZIP/Postal code 94143-0512
Country USA
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (18)
GSM3756186 CTL1: control tissue (Ctl1_L1.D701)
GSM3756187 CTL2: control tissue (Ctl2_L2)
GSM3756188 CTL3: control tissue (Ctl5_L4)
This SubSeries is part of SuperSeries:
GSE130922 MYC Dysregulates Mitotic Spindle Function Creating a Dependency on TPX2
Relations
BioProject PRJNA541946
SRA SRP197129

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130921_counts_MTBTOM.csv.gz 801.0 Kb (ftp)(http) CSV
GSE130921_mmtv_rna_seq_de.csv.gz 1.5 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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