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Series GSE131487 Query DataSets for GSE131487
Status Public on Feb 26, 2020
Title PRDM16 ChIP-Seq in Prdm16 WT and KO duodenal crypts
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary PRDM16 ChIP was perfomed in control and Prdm16 KO crypts isolated from the duodenum of 6 week old mice 3 days after inducible gene deletion
 
Overall design 6 samples
 
Contributor(s) Seale P, Stine RR
Citation(s) 31564549
Submission date May 20, 2019
Last update date Feb 26, 2020
Contact name Patrick Seale
Organization name University of Pennsylvania
Department Institute for Diabetes, Obesity & Metabolism
Street address Smilow Center for Translational Research, 12th Floor 3400 Civic Center Blvd. Bldg 421
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (6)
GSM3781545 Control Prdm16 ChipSeq 1
GSM3781546 Control Prdm16 ChipSeq 2
GSM3781547 Prdm16 KO Prdm16 ChipSeq 1
This SubSeries is part of SuperSeries:
GSE121014 Control of region-specific intestinal metabolism and maintenance by PRDM16
Relations
BioProject PRJNA543833
SRA SRP198935

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131487_Intestine_Prdm16_KO_pool.res1.bw 642.0 Mb (ftp)(http) BW
GSE131487_Intestine_Prdm16_WT_pool.homer.200bp.exBL.1rpm.bed.gz 183.9 Kb (ftp)(http) BED
GSE131487_Intestine_Prdm16_WT_pool.res1.bw 664.7 Mb (ftp)(http) BW
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Raw data are available in SRA
Processed data are available on Series record

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