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Series GSE131748 Query DataSets for GSE131748
Status Public on Jun 24, 2019
Title Expression data form P90 mouse hippocampus - various mutant condition
Organism Mus musculus
Experiment type Expression profiling by array
Summary The level of Synaptotagmin-2 (Syt2) was altered by deletion of IPMK protein in the male mouse brain. We investigated gene expression changes in the hippocampal region of IPMK conditional knockout (cKO) mice by performing genome-wide transcriptome analyses.
In this dataset, we include the expression data obtained from dissected mouse hippocampus using loss-of-function IPMK mutants. These data are used to obtain 5 genes that are differentially expressed in response to IPMK signaling
 
Overall design 4 Total samples were analyzed. We prepared two sample mRNA of each group, IPMK WT & IPMK cKO. Genes with an FDR≤10% and a fold-change ≥1.5 were selected.
 
Contributor(s) Park J, Kim S
Citation(s) 31221192
Submission date May 24, 2019
Last update date Jun 27, 2019
Contact name Jina Park
E-mail(s) nagajina@kaist.ac.kr
Organization name KAIST
Department Biological Science
Lab Metabolism Signaling Network lab
Street address 291 Daehak-ro, Yuseong-gu
City Daejeon
ZIP/Postal code 34141
Country South Korea
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (4)
GSM3815011 wild type hippocampus at P90, biological rep1
GSM3815012 wild type hippocampus at P90, biological rep2
GSM3815013 IPMK loss-of-function mutant hippocampus at P90, biological rep1
Relations
BioProject PRJNA544678

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131748_Complete_set_of_log_value_2.xlsx 21.3 Mb (ftp)(http) XLSX
GSE131748_RAW.tar 34.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table
Processed data are available on Series record

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