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Status |
Public on Jun 24, 2019 |
Title |
Expression data form P90 mouse hippocampus - various mutant condition |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array
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Summary |
The level of Synaptotagmin-2 (Syt2) was altered by deletion of IPMK protein in the male mouse brain. We investigated gene expression changes in the hippocampal region of IPMK conditional knockout (cKO) mice by performing genome-wide transcriptome analyses. In this dataset, we include the expression data obtained from dissected mouse hippocampus using loss-of-function IPMK mutants. These data are used to obtain 5 genes that are differentially expressed in response to IPMK signaling
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Overall design |
4 Total samples were analyzed. We prepared two sample mRNA of each group, IPMK WT & IPMK cKO. Genes with an FDR≤10% and a fold-change ≥1.5 were selected.
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Contributor(s) |
Park J, Kim S |
Citation(s) |
31221192 |
Submission date |
May 24, 2019 |
Last update date |
Jun 27, 2019 |
Contact name |
Jina Park |
E-mail(s) |
nagajina@kaist.ac.kr
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Organization name |
KAIST
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Department |
Biological Science
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Lab |
Metabolism Signaling Network lab
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Street address |
291 Daehak-ro, Yuseong-gu
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City |
Daejeon |
ZIP/Postal code |
34141 |
Country |
South Korea |
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Platforms (1) |
GPL16570 |
[MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version] |
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Samples (4)
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GSM3815011 |
wild type hippocampus at P90, biological rep1 |
GSM3815012 |
wild type hippocampus at P90, biological rep2 |
GSM3815013 |
IPMK loss-of-function mutant hippocampus at P90, biological rep1 |
GSM3815014 |
IPMK loss-of-function mutant hippocampus at P90, biological rep2 |
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Relations |
BioProject |
PRJNA544678 |