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| Status |
Public on Aug 01, 2019 |
| Title |
Transcriptomic data of established mouse prostate cancer cell lines like RM1 and Pten Smad4 |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
RM1 and Pten Smad4 are two mouse models with mesenchymal and stem like features. We applied the RNA Seq to provide the transcriptomic profiling of these two cell lines.
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| Overall design |
RNA Seq of RM1 and Pten Smad4 cell lines have 3 replicates each. BioProject accession - PRJNA535445. SRA Study accession are as follows: 1_Pten_Smad4 SRR9110007 ; 2_Pten_Smad4 SRR9110006 ; 3_Pten_Smad4 SRR9110005 ; 4_RM1 SRR9110004 ; 5_RM1 SRR9110003 ; 6_RM1 SRR9110002
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| |
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| Contributor(s) |
Rumandla A, Wang Y |
| Citation(s) |
31327655 |
| BioProject |
PRJNA535445 |
| Submission date |
May 28, 2019 |
| Last update date |
Oct 31, 2019 |
| Contact name |
Filippo Giancotti |
| E-mail(s) |
fg2532@cumc.columbia.edu
|
| Organization name |
UT MD Anderson Cancer Center
|
| Department |
Cancer Biology
|
| Lab |
Dr. Giancotti Lab
|
| Street address |
1881 East Road
|
| City |
Houston |
| State/province |
Texas |
| ZIP/Postal code |
77054 |
| Country |
USA |
| |
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| Platforms (1) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE131830 |
Transcriptomic data and Genome-wide maps of chromatin state in prostate cancer |
|
| Relations |
| SRA |
SRP193842 |
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