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Series GSE131895 Query DataSets for GSE131895
Status Public on Oct 01, 2020
Title RNA analysis of Nr4a1 and Nr4a1-knockout mammary tumor cells from MMTV-PyVT transgenic mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary MMTV-PyVT Mammary tumors were harvested from PyVT-wild-type (WT), PyVT-Nr4a1 knockout (KO) littermates on a congenic FVB/NJ background,minced and incubated with collagenase type I digestion solution .The digested Mammary tumor cells were collected and maintained in DMEM medium containing 10% FBS for 24 hour.
 
Overall design Differential mRNA expression of Mammary tumor cells between PyVT-wild-type (WT) mice and age matched PyVT-Nr4a1 knockout (KO) mice was quantified by RNA-seq data analysis
 
Contributor(s) Wu Q, Chen H, Yang P
Citation(s) 33087562
Submission date May 29, 2019
Last update date Jan 02, 2021
Contact name yang pengbo
E-mail(s) yangpb@stu.xmu.edu.cn
Phone 8618059230709
Organization name xiamen university
Street address xiangan
City xiamen
ZIP/Postal code 361101
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM3825583 PyVT-Nr4a1-WT1
GSM3825584 PyVT-Nr4a1-WT2
GSM3825585 PyVT-Nr4a1-WT3
Relations
BioProject PRJNA545286
SRA SRP199757

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE131895_pymt_WT_vs_KO_raw_count.txt.gz 165.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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