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Series GSE132406 Query DataSets for GSE132406
Status Public on Jun 08, 2019
Title Methylation analysis of Epstein-Barr virus-associated gastric cancer case
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary The comprehensive DNA methylation status of gastric cancer cells obtained from an advanced Epstein-Barr virus-associated gastric cancer case, in which complete response to S-1 plus cisplatin chemotherapy was achieved, was analyzed with DNA methylation microarray (Illumina Infinium MethylationEPIC BeadChip). DNA was extracted from metastatic lesion (lymph node).
 
Overall design Bisulphite-converted DNA from one sample was hybridised to the Illumina Infinium MethylationEPIC BeadChip.
 
Contributor(s) Ohmura H
Citation(s) 31736281
Submission date Jun 07, 2019
Last update date Nov 19, 2019
Contact name Hirofumi Ohmura
E-mail(s) hirofumiohmura-kyu@umin.ac.jp
Organization name Department of Medicine and Biosystemic Science, Kyushu University Graduate School of Medical Sciences
Street address 3-1-1 Maidashi
City Fukuoka
ZIP/Postal code 812-8582
Country Japan
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (1)
GSM3862897 EBVGC lymph node 1
Relations
BioProject PRJNA547827

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132406_BA0163_RAW_data.txt.gz 179.7 Mb (ftp)(http) TXT
GSE132406_BA0163_normalized_data.txt.gz 179.7 Mb (ftp)(http) TXT
GSE132406_RAW.tar 175.3 Mb (http)(custom) TAR (of IDAT)
GSE132406_unmethylated_methylated_signal_intensities.txt.gz 7.1 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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