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Series GSE132552 Query DataSets for GSE132552
Status Public on Nov 25, 2019
Title Transcriptional changes after spinal cord injury: recruitment of afferents distal to the site of injury
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Nociceptors are thought to play an important role in chronic pain, but the heterogeneity of this population has made it challenging to understand the underlying mechanisms that attribute pain modalities to specific cell types. We screened for transcript changes within a population of dorsal root ganglion (DRG) cells that are known to be responsible for pain transduction 4 days following spinal cord injury (SCI) to identify genes not previously known to play a role in the transition from chronic to acute pain. We identified genes that had not previously been recognized as major contributors in the development of chronic pain, as well as confirmed previously identified transcription factors already known to play a role in chronic pain.
 
Overall design Examination of mRNA profiles in subpopulation of dorsal root ganglion cells after spinal cord injury, followed by quantitative PCR analysis.
 
Contributor(s) Mains RE, Yasko JR
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Submission date Jun 11, 2019
Last update date Nov 25, 2019
Contact name Richard E Mains
E-mail(s) jyasko@uchc.edu
Organization name UConn Health
Department Neuroscience
Street address 263 Farmington Ave
City Farmington
State/province CT
ZIP/Postal code 06030
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (15)
GSM3874565 N1
GSM3874566 N2
GSM3874567 N3
Relations
BioProject PRJNA548346
SRA SRP201114

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132552_RPKM_RNAseq_SCI-Data_Analysis_.xlsx 7.6 Mb (ftp)(http) XLSX
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Processed data are available on Series record

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