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Series GSE132650 Query DataSets for GSE132650
Status Public on Jun 26, 2019
Title Mayo GBM Patient Derived Xenograft National Resource
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of GBM xenografts. The Illumina EPIC 850k Human DNA methylation array used to obtain DNA methylation profiles across approximately 800,000 CpGs in GBM xenograft samples. Samples included xx GBM xenografts.
 
Overall design Bisulphite converted DNA from the 78 samples were hybridised to the Illumina Infinium Human MethylationEPIC Beadchip
 
Contributor(s) Sarkaria J
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jun 12, 2019
Last update date Jun 28, 2019
Contact name Shulan Tian
E-mail(s) tian.shulan@mayo.edu
Organization name Mayo Clinic
Department Health Science Research
Street address 200 1st street SW
City ROCHESTER
State/province Minnesota
ZIP/Postal code 55902
Country USA
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (78)
GSM3884787 167 genomic DNA from GBM xenograft
GSM3884788 159 genomic DNA from GBM xenograft
GSM3884789 9 genomic DNA from GBM xenograft
Relations
BioProject PRJNA548580

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE132650_Matrix_signal_intensities.txt.gz 449.4 Mb (ftp)(http) TXT
GSE132650_RAW.tar 1.2 Gb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
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