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Series GSE132748 Query DataSets for GSE132748
Status Public on Jun 15, 2019
Title Expression data for tumor-infiltrating CD45+ cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Regulatory T (Treg) cells are crucial for immune homeostasis but they also contribute to tumor immune evasion by promoting a suppressive tumor microenvironment (TME). Mice with Treg cell-restricted Neuropilin 1 deficiency show tumor resistance while maintaining peripheral immune homeostasis, thereby providing a controlled system to interrogate the impact of intratumoral Treg cells on the TME. Using this and other genetic models, we showed that Treg cells shaped the transcriptional landscape across multiple tumor-infiltrating immune cell types. Treg cells suppressed CD8+ T cell secretion of interferon- (IFN), which would otherwise block the activation of sterol regulatory element-binding protein 1 (SREBP1)-mediated fatty acid synthesis in immunosuppressive (M2-like) tumor-associated macrophages (TAMs). Thus, Treg cells indirectly but selectively sustained M2-like TAM metabolic fitness, mitochondrial integrity and survival. SREBP1 inhibition augmented the efficacy of immune checkpoint blockade, suggesting that targeting Treg cells or their modulation of lipid metabolism in M2-like TAMs could improve cancer immunotherapy.
Microarray gene expression assay was performed to interogate the impact of fragile (Nrp1–/–) Tregs on the gloabal transcriptome oftumor immune infiltrates (CD45+ cells) at various time points over the course of tumor growth.
 
Overall design B16. F10 or MC38 tumor -infiltrating CD45+ cells isolated from the Foxp3Cre-YFP or Nrp1L/LFoxp3Cre-YFP mice on designated days over the course of tumor growth
 
Contributor(s) Liu C, Vignali DA
Citation(s) 31350177
Submission date Jun 14, 2019
Last update date Sep 15, 2019
Contact name Chang of Liu
E-mail(s) changliu@pitt.edu
Phone 9014871716
Organization name University of Pittsburgh
Department Immunology
Lab Dr. Dario A.A. Vignali
Street address 200 Lothrop Street, W1028-22A, Biomedical Science Tower
City Pittsburgh
State/province PENNSYLVANIA
ZIP/Postal code 15213
Country USA
 
Platforms (1)
GPL11180 [HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate
Samples (28)
GSM3891240 B16_d18_CD45+_FYC_Rep1
GSM3891241 B16_d18_CD45+_FYC_Rep2
GSM3891242 B16_d18_CD45+_FYC_Rep3
Relations
BioProject PRJNA548914

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Supplementary file Size Download File type/resource
GSE132748_RAW.tar 56.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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