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Series GSE133339 Query DataSets for GSE133339
Status Public on Sep 26, 2019
Title The zingerone analog, acetyl zingerone, bolsters matrisome synthesis, inhibits MMPs, and represses IL-17A target gene expression [Experiment 2]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Zingerone (Z) is a phenolic alkanone derived from natural sources with anti-inflammatory and antioxidant effects. Acetyl zingerone (AZ) is a newly designed molecule that shares structural features with Z but is expected to have improved stability and antioxidant function. This study utilized microarrays to compare effects of Z and AZ on gene expression in reconstituted human epidermis. Both Z and AZ increased Notch pathway gene expression (NOTCH1, MAML3) and decreased expression of genes linked to extracellular matrix disassembly (MMP3, CTSV) and reactive oxygen species metabolism (PMAIP1, ARG2). Although Z and AZ each inhibited in vitro MMP-1, MMP-3 and MMP-12 activity, inhibition of MMP-3 and MMP-12 was greater with AZ. Moreover, AZ led to more consistent increases in the expression of genes encoding collagens (COL11A2), proteoglycans (VCAN) and ECM glycoproteins (SPARC). Finally, AZ opposed gene expression patterns associated with fibroblast senescence, keratinocyte differentiation, and IL-17A stimulation. These effects were AZ-specific and not replicated by Z. These results show that AZ improves extracellular matrix integrity with retinoid-like effects on differentiation and inflammation. Our findings provide rationale for clinical studies to understand benefits of AZ in the treatment or prevention of skin aging, or potentially, as a treatment for other human skin diseases.
Microarray analyses was performed to characterize global gene expression responses to acetyl zingerone (AZ) (50 μg/ml) in EpiDerm FT (RHE) tissue cultures.
 
Overall design EpiDerm FT (RHE) tissues were treated with CTL or AZ for a 24 hour period. Water was used as the control and the AZ concentration was 50 μg/ml. RNA was then extracted and samples were then sent for DNA microarray analysis (Agilent microarrays, Human version 8X60K).
 
Contributor(s) Swindell WR, Bojanowski K, Chaudhuri RK
Citation(s) 31465741
Submission date Jun 26, 2019
Last update date Dec 28, 2019
Contact name William R Swindell
E-mail(s) wswindel@umich.edu
Organization name University of Michigan
Department Dermatology
Street address 1500 E. Medical Center Drive
City Ann Arbor
State/province MI
ZIP/Postal code 48104
Country USA
 
Platforms (1)
GPL17077 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
Samples (4)
GSM3905992 EpiDerm FT (RHE), CTL, replicate 1
GSM3905993 EpiDerm FT (RHE), CTL, replicate 2
GSM3905994 EpiDerm FT (RHE), AZ, replicate 1
This SubSeries is part of SuperSeries:
GSE133340 The zingerone analog, acetyl zingerone, bolsters matrisome synthesis, inhibits MMPs, and represses IL-17A target gene expression
Relations
BioProject PRJNA551212

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133339_RAW.tar 12.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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