NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE133801 Query DataSets for GSE133801
Status Public on Jul 14, 2020
Title DNA methylation analysis of pineoblastoma
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Pineoblastoma is a rare and aggressive embryonal tumor of childhood. The molecular heterogeneity within has not been systematically evaluated. In this study, we used methylation profiling to compare the signatures of pineoblastoma and other pineal parenchymal tumors to a reference cohort of brain tumor entities (GSE90496) , clinically relevant epigenomic subgroups with characteristics genomic/transcriptomic features are described.
 
Overall design Human pineal parenhchymal tumors (n=43), including 40 pineoblastomas, were profiled using Illumina Infinium Human MethylationEpic Bead Array
 
Contributor(s) Liu A, Lin T
Citation(s) 31802236
Submission date Jul 03, 2019
Last update date Jul 14, 2020
Contact name Anthony Pak-Yin Liu
E-mail(s) anthony.liu@stjude.org
Phone 313-502-6264
Organization name St. Jude Children's Research Hospital
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38103
Country USA
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (43)
GSM3927480 SJPB01
GSM3927481 SJPB02
GSM3927482 SJPB03
Relations
BioProject PRJNA552573

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE133801_RAW.tar 768.4 Mb (http)(custom) TAR (of IDAT)
GSE133801_beta_all.txt.gz 8.5 Gb (ftp)(http) TXT
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap