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| Status |
Public on Jul 27, 2019 |
| Title |
Human islets of varying quality: the good, the (not so) bad and the ugly |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
This collection represents whole transcriptome data for human islets that were stratified to high quality (Group 1), intermediary quality (Group 2) and poor quality (Group 3) islets (Wong WKM et al JCI Insight 2019).
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| Overall design |
Randomly selected islet preparations based on their post-isolation quality.
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| Contributor(s) |
Wong W, Joglekar MV, Chew Y, Hawthorne WJ, Hardikar AA |
| Citation(s) |
31361602, 33981968 |
| Submission date |
Jul 10, 2019 |
| Last update date |
May 19, 2021 |
| Contact name |
Anand Hardikar |
| E-mail(s) |
anand.hardikar@ctc.usyd.edu.au
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| Phone |
61488119772
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| Organization name |
University of Sydney
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| Street address |
92-94 Parramatta Road
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| City |
Camperdown |
| State/province |
NSW |
| ZIP/Postal code |
2050 |
| Country |
Australia |
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| Platforms (1) |
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| Samples (18)
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| GSM3935892 |
Primary islet cells, quality 1, S177 |
| GSM3935893 |
Primary islet cells, quality 3, S178 |
| GSM3935894 |
Primary islet cells, quality 2, S234 |
| GSM3935895 |
Primary islet cells, quality 2, S263 |
| GSM3935896 |
Primary islet cells, quality 3, S298 |
| GSM3935897 |
Primary islet cells, quality 1, S321 |
| GSM3935898 |
Primary islet cells, quality 1, S396 |
| GSM3935899 |
Primary islet cells, quality 3, S458 |
| GSM3935900 |
Primary islet cells, quality 2, S462 |
| GSM3935901 |
Primary islet cells, quality 2, S574 |
| GSM3935902 |
Primary islet cells, quality 1, S712 |
| GSM3935903 |
Primary islet cells, quality 2, S726 |
| GSM3935904 |
Primary islet cells, quality 3, S745 |
| GSM3935905 |
Primary islet cells, quality 3, S975 |
| GSM3935906 |
Primary islet cells, quality 3, S976 |
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| Relations |
| BioProject |
PRJNA553683 |
| SRA |
SRP214060 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE134068_Annotated_lncRNA_FPKM.xlsx |
1.3 Mb |
(ftp)(http) |
XLSX |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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