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| Status |
Public on Jul 19, 2019 |
| Title |
Super deepSAGE sequencing of normal porcine tissues |
| Organism |
Sus scrofa |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
High-density gene expression profile of 70,000+ unique genes for 224 normal porcine samples from 28 different tissues of 32 different animals using Super deepSAGE sequencing technology.
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| Overall design |
A total of 224 tissue samples across 28 different tissues/cells were collected from a slaughtering farm located in Hubei province in china. The samples were collected from 32 animals from a Duroc × Landrace × Yorkshare (DLY) commercial crossbreed pig populations consisting of 16 males and 16 females with a median age of 21 days. The endometrium, placenta, and conceptus were collected from Landrace × Yorkshare (LY) sows of 65 days of gestation. Total RNA were extracted and the libraries were construsted using Super deepSAGE technology and submitted for deep sequencing.
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| Contributor(s) |
Huang T, Yao M |
| Citation(s) |
32171242 |
| Submission date |
Jul 18, 2019 |
| Last update date |
Mar 23, 2020 |
| Contact name |
Tinghua Huang |
| E-mail(s) |
thua45@yangtzeu.edu.cn
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| Phone |
8613397215027
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| Organization name |
Yangtze University
|
| Street address |
Jingmi Road #266
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| City |
Jingzhou |
| ZIP/Postal code |
434025 |
| Country |
China |
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| Platforms (1) |
| GPL11429 |
Illumina HiSeq 2000 (Sus scrofa) |
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| Samples (224)
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| Relations |
| BioProject |
PRJNA555410 |
| SRA |
SRP215417 |
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