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Series GSE134895 Query DataSets for GSE134895
Status Public on May 22, 2020
Title The microRNA miR-22 represses T helper 17 cell pathogenicity by targeting PTEN-regulated pathways
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Multiple sclerosis is a chronic autoimmune disease driven by pathogenic Th17 cells. Here, we dissected the role of miR-22 in pathogenic Th17 cells by autoantigen-specific disease models. We first showed that miR-22 was upregulated in peripheral lymphoid organs and spinal cords of mice developed autoimmune encephalomyelitis. Although miR-22 was upregulated in multiple helper T cell subsets, it was dispensable for T helper cell differentiation in vitro. While miR-22-/- mice exhibited milder symptoms of disease in an active EAE model, adoptive transfer of miR-22-/- 2D2 Th17 cells into naive recipient mice promoted higher disease incidence and severity compared to mice transferred with control 2D2 Th17 cells. Global transcriptional analysis of miR-22-deficient pathogenic Th17 cells revealed upregulated genes in phosphatase and tensin homologue (PTEN)-mediated pathways, and Pten was further identified as one of its potential targets. Therefore, we identified that Th17 cell intrinsic-miR-22 could protect mice from autoimmunity by targeting PTEN-regulated pathways.
 
Overall design RNA-seq for Mir-22 wild-type and knock-out in Th17 (23) cells with 3 replicates.
 
Contributor(s) Wang L, Qiu R, Zhang Z, Han Z, Yao C, Hou G, Dai D, Jin W, Tang Y, Yu X, Shen N
Citation(s) 32518131
Submission date Jul 25, 2019
Last update date Aug 21, 2020
Contact name Zhijun Han
E-mail(s) hangeneral@126.com
Organization name Southern University of Science and Technology
Street address No 1088,xueyuan Rd., Nanshan District
City Shenzhen
State/province Guangdong
ZIP/Postal code 518055
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (6)
GSM3976570 Th17(23)_miR-22-/- RNA-seq rep1
GSM3976571 Th17(23)_miR-22-/- RNA-seq rep2
GSM3976572 Th17(23)_miR-22-/- RNA-seq rep3
Relations
BioProject PRJNA556698
SRA SRP216410

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE134895_RAW.tar 600.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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