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Series GSE135015 Query DataSets for GSE135015
Status Public on Dec 31, 2019
Title Chimeric Antigen Receptor-Induced Bcl11b Suppression Propagates Natural Killer-Like Cell Development
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The transcription factor B Cell CLL/Lymphoma 11B (BCL11B) is indispensable for T lineage development of lymphoid progenitors. Here we show that chimeric antigen receptor (CAR) expression early in ex vivo generated lymphoid progenitors suppresses Bcl11b, leading to suppression of T cell-associated gene expression and acquisition of natural killer (NK) cell-like properties. These results give important insights into differentiation of murine and human lymphoid progenitors driven by synthetic CAR transgene-expression and inform the potential use of ex vivo generated CARiK cells as a broadly applicable product for targeted immunotherapy.
 
Overall design Microarray data analysis of sorted human CAR-engineered lymphoid progenitors (h1928z3: n=3; h19delta: n= 5; h1928z3 + hCD19: n= 3) from OP9-DL1 in vitro cultures on day 18. Human CD34+ HSPCs derived from umbilical cord blood samples were engineered with a CD28-based second-generation human CAR targeting human CD19 (h1928z3) or a non-signaling control CAR (h19delta) and pre-differentiated on OP9-DL1 stromal cells in vitro. For CAR stimulation, irradiated CD19+ Daudi cells were added during the culture (h1928z3_stim).
 
Contributor(s) Maluski M, Sauer MG, Geffers R
Citation(s) 31479431
Submission date Jul 29, 2019
Last update date Apr 10, 2020
Contact name Robert Geffers
E-mail(s) robert.geffers@helmholtz-hzi.de
Phone +49 531-6181-3058
Organization name HCI - Helmholtz Centre for Infection Research
Department Dep. Molecular Bacteriology
Lab Genome Analytics
Street address Inhoffenstr. 7
City Braunschweig
ZIP/Postal code 38124
Country Germany
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (11)
GSM3983646 h1928z_1
GSM3983647 h1928z_2
GSM3983648 h1928z_3
Relations
BioProject PRJNA557165

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135015_RAW.tar 10.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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