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Series GSE13520 Query DataSets for GSE13520
Status Public on Mar 12, 2010
Title Expression profiles of (40,XX) and (39,XO) females
Organism Mus musculus
Experiment type Expression profiling by array
Summary Gobal expression analysis in four somatic tissues (brain, liver, kidney and muscle) of adult 40,XX and 39,XO mice with the aim of identifying which genes are expressed from both X chromosomes as well as those genes deregulated in X chromosome monosomy.

Keywords: Expression profiling by array
 
Overall design For each tissue, the RNA samples of seven 40,XX, eight 39,XpO and eight 39,XmO mice were pooled by genotype into 9 groups, representing 3 biological replicates per genotype, as follows: 39,XpO-1 and 39,XpO-2 (3 pooled individuals each), 39,XpO-3 (2 pooled individuals); 39,XmO-1 and 39,XmO-2 (3 pooled individuals each), 39,XmO-3 (2 pooled individuals); 40,XX-1 and 40,XX-2 (3 pooled individuals each) 40,XX-3 (2 pooled individuals)
 
Contributor(s) Lopes AM, Burgoyne PS, Ojarikre A, Bauer J, Sargent C, Affara NA
Citation(s) 20122165
Submission date Nov 07, 2008
Last update date Jan 18, 2013
Contact name Alexandra M. Lopes
E-mail(s) alopes@ipatimup.pt
Organization name IPATIMUP
Lab Population Genetics
Street address R. Dr. Roberto Frias s/n
City Porto
ZIP/Postal code 4200-465
Country Portugal
 
Platforms (1)
GPL6105 Illumina mouse-6 v1.1 expression beadchip
Samples (36)
GSM340905 XX1-L
GSM340906 XX2-L
GSM340907 XX3-L
Relations
BioProject PRJNA110129

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13520_RAW.tar 5.2 Mb (http)(custom) TAR
GSE13520_raw_data.txt.gz 3.2 Mb (ftp)(http) TXT
Raw data are available on Series record
Processed data included within Sample table

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