NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE135220 Query DataSets for GSE135220
Status Public on Oct 23, 2019
Title Human cell line and subcutaneous tumor
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To find different gene expression signature in OVCAR5 cells with PTPRR -WT expression or PTPRR-DA expression compared with control cells, we did RNA-seq analyses.To find different gene expression signature in xenagraft tumors generated from OVCAR5 cells with PTPRR -WT expression or PTPRR-DA expression compared with control cells, we did RNA-seq analyses.
 
Overall design For cell ine RNA-seq, each sample was triplicated. For tumor RNA-seq, each sample was duplicated.
 
Contributor(s) Yuetong W, Liu W, Zhang Y, Fan G
Citation(s) 31653698
Submission date Aug 01, 2019
Last update date Oct 29, 2019
Contact name Yuetong Wang
E-mail(s) wangyt@fudan.edu.cn
Phone 54921107
Organization name Chinese Academy of Sciences
Department Institute of Biochemistry and Cell Biology Shanghai Institutes for Biological Sciences
Street address 320 Yue Yang Road, Room 713
City Shanghai
ZIP/Postal code 200031
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (15)
GSM3995369 XENO_OVCAR5 Ctrl-1
GSM3995370 XENO_OVCAR5 Ctrl-2
GSM3995371 XENO_OVCAR5 Ctrl-3
Relations
BioProject PRJNA557838
SRA SRP217039

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135220_PTPRR_hCL.counts.matrix.txt.gz 336.8 Kb (ftp)(http) TXT
GSE135220_PTPRR_mTM.count.matrix.txt.gz 519.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap