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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 23, 2020 |
| Title |
Enhancer RNAs mediate estrogen-induced decommissioning of selective enhancers by recruiting ER and its cofactor |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
32579929 |
| Submission date |
Aug 03, 2019 |
| Last update date |
Sep 22, 2020 |
| Contact name |
Kexin Xu |
| Organization name |
UT Health Science Center at San Antonio
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| Department |
Molecular Medicine
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| Street address |
7703 Floyd Curl, MC 8257
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| City |
San Antonio |
| State/province |
Texas |
| ZIP/Postal code |
78229 |
| Country |
USA |
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| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
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| Samples (24)
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| GSM4006661 |
MCF7, dDBD_Veh_rep2 (RNA-Seq) |
| GSM4006662 |
MCF7, Vector_E2_rep1 (RNA-Seq) |
| GSM4006663 |
MCF7, Vector_E2_rep2 (RNA-Seq) |
| GSM4006664 |
MCF7, Vector_Veh_rep1 (RNA-Seq) |
| GSM4006665 |
MCF7, Vector_Veh_rep2 (RNA-Seq) |
| GSM4006666 |
MCF7, WT_E2_rep1 (RNA-Seq) |
| GSM4006667 |
MCF7, WT_E2_rep2 (RNA-Seq) |
| GSM4006668 |
MCF7, WT_Veh_rep1 (RNA-Seq) |
| GSM4006669 |
MCF7, WT_Veh_rep2 (RNA-Seq) |
| GSM4006670 |
MCF7, dAF2_ER_E2 (ChIP-Seq) |
| GSM4006671 |
MCF7, dAF2_ER_Veh (ChIP-Seq) |
| GSM4006672 |
MCF7, dDBD_ER_E2 (ChIP-Seq) |
| GSM4006673 |
MCF7, dDBD_ER_Veh (ChIP-Seq) |
| GSM4006674 |
MCF7, noRnase_ER_E2 (ChIP-Seq) |
| GSM4006675 |
MCF7, Rnase_ER_E2 (ChIP-Seq) |
| GSM4006676 |
MCF7, noRnase_ER_Veh (ChIP-Seq) |
| GSM4006677 |
MCF7, Rnase_ER_Veh (ChIP-Seq) |
| GSM4006678 |
MCF7, WT_ER_E2 (ChIP-Seq) |
| GSM4006679 |
MCF7, WT_ER_Veh (ChIP-Seq) |
| GSM4006680 |
MCF7, BLRP-ER pBOX (ChIP-Seq) |
| GSM4006681 |
MCF7, BLRP-ER Wild type (ChIP-Seq) |
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| This SuperSeries is composed of the following SubSeries: |
| GSE135339 |
Enhancer RNA mediate estrogen-induced transcriptional repression by recruiting ERa and its cofactor to selective enhancers [RNA-Seq] |
| GSE135340 |
Enhancer RNA mediate estrogen-induced transcriptional repression by recruiting ERa and its cofactor to selective enhancers [ChIP-Seq] |
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| Relations |
| BioProject |
PRJNA558466 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE135341_RAW.tar |
2.0 Gb |
(http)(custom) |
TAR (of BW) |
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