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Series GSE135496 Query DataSets for GSE135496
Status Public on Jun 17, 2020
Title Lactate production by Staphylococcus aureus biofilm inhibits HDAC11 to reprogramme the host immune response during persistent infection
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32661313
Submission date Aug 07, 2019
Last update date Sep 16, 2020
Contact name Adam R. Karpf
E-mail(s) adam.karpf@unmc.edu
Phone 402-559-6115
Organization name University of Nebraska Medical Center
Department Eppley Institute for Research in Cancer
Street address 985950 Nebraska Medical Center
City Omaha
State/province Nebraska
ZIP/Postal code 68198-5950
Country USA
 
Platforms (2)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21626 NextSeq 550 (Mus musculus)
Samples (10)
GSM4012664 WT H3Ac_ChIPSeq Rep1
GSM4012665 Triple Mutant H3Ac_ChIPSeq Rep1
GSM4012666 WT Input H3Ac_ChIPSeq Rep1
This SuperSeries is composed of the following SubSeries:
GSE135494 Lactate production by Staphylococcus aureus biofilm inhibits HDAC11 to reprogramme the host immune response during persistent infection [ChIP-seq]
GSE135495 Lactate production by Staphylococcus aureus biofilm inhibits HDAC11 to reprogramme the host immune response during persistent infection [RNA-seq]
Relations
BioProject PRJNA559090

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135496_RAW.tar 2.0 Gb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp

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