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Series GSE136010 Query DataSets for GSE136010
Status Public on Jun 19, 2020
Title Epigenomic analysis of Parkinson's disease neurons identifies TET2 loss as neuroprotective
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32807949
Submission date Aug 19, 2019
Last update date Oct 19, 2023
Contact name Lee Marshall
E-mail(s) lee.marshall@vai.org
Phone 616 920 9824
Organization name Van Andel Research Institute
Department Center for Neurodegenerative Science
Lab Viviane Labrie
Street address 333 Bostwick Ave NE
City Grand Rapids
State/province MI
ZIP/Postal code 49503
Country USA
 
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (107)
GSM4006390 CTRL_C6_PD_TET2_Bisulfite_Padlock_Seq
GSM4006391 CTRL_E9_PD_TET2_Bisulfite_Padlock_Seq
GSM4006392 CTRL_E10_PD_TET2_Bisulfite_Padlock_Seq
This SuperSeries is composed of the following SubSeries:
GSE135332 Epigenomic analysis of Parkinson’s disease neurons identifies TET2 loss as neuroprotective [PD_TET2_Bisulfite_Padlock_Seq]
GSE135333 Epigenomic analysis of Parkinson’s disease neurons identifies TET2 loss as neuroprotective [TET2i_Bisulfite_Padlock_seq]
GSE135334 Epigenomic analysis of Parkinson’s disease neurons identifies TET2 loss as neuroprotective [TET2_LPS_RNA_Seq]
Relations
BioProject PRJNA560930

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136010_RAW.tar 3.3 Gb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
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