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Series GSE136065 Query DataSets for GSE136065
Status Public on Jun 04, 2020
Title Genome-wide mapping of Runx3 bound regions in dendritic cell line D1.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq was conducted using D1 cells and in house anti-Runx3 antibodies (Ab).
 
Overall design Three biological Runx3 IP test repeats and two Rabbit non-immune serum IP controls from D1 cell line.
 
Contributor(s) Hantisteanu S, Leshkowitz D, Groner Y
Citation(s) 32453801
Submission date Aug 20, 2019
Last update date Jun 04, 2020
Contact name Dena Leshkowitz
E-mail(s) dena.leshkowitz@weizmann.ac.il
Organization name Weizmann Institute of Science
Department Bioinformatics Unit, Life Sciences Core Facilities
Street address P.O.B. 26
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL9185 Illumina Genome Analyzer (Mus musculus)
Samples (5)
GSM4040393 Runx3-1_ChIP-seq
GSM4040394 Runx3-2_ChIP-seq
GSM4040395 Runx3-3_ChIP-seq
This SubSeries is part of SuperSeries:
GSE136067 Runx3 prevents spontaneous colitis by directing differentiation of anti-inflammatory mononuclear phagocytes
Relations
BioProject PRJNA561154
SRA SRP218831

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136065_macs2_RX3vsNIS_peaks.xlsx 1.0 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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