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Series GSE136331 Query DataSets for GSE136331
Status Public on Feb 04, 2020
Title Role of engrailed 2 (EN2) in esophageal squamous cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary A number of homeobox genes have been found to be implicated in the development of various cancers. Here, we investigated the role of engrailed 2 (EN2), a member of the homeobox gene superfamily, in esophageal squamous cell carcinoma
 
Overall design RNA profiling was performed using gene expression microarray. A lentivirus system was used to establish a stable cell line expressing exogenous EN2. The malignant phenotype was analyzed by means of proliferation, clonogenicity, wound-healing, and invasion assays. The CRISPR/Cas9 system was adopted to deplete the endogenous EN2. The ShRNA-mediated method was used to knock down the expression of SPARC. Separately, the structure–function relationship was determined by the site-directed mutagenesis method.
 
Contributor(s) Cao Y, Wang X, Tang L, Li Y, Song X, Liu X, Li M, Chen F, Wan H
Citation(s) 32117645
Submission date Aug 26, 2019
Last update date Mar 09, 2020
Contact name xu liu
E-mail(s) liu-xu@hotmail.com
Organization name The Affiliated Hospital of Southwest Medical University
Street address 25th Taiping Street
City Luzhou
ZIP/Postal code 646000
Country China
 
Platforms (2)
GPL23126 [Clariom_D_Human] Affymetrix Human Clariom D Assay [transcript (gene) version]
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (10)
GSM4046306 ky-N1
GSM4046307 ky-E1
GSM4046308 ky-N2
Relations
BioProject PRJNA562267

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136331_RAW.tar 54.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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