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Series GSE136993 Query DataSets for GSE136993
Status Public on Aug 31, 2020
Title GM-CSF-transduced proliferating myeloid cells represent cell cycle related gene signature
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We previously established a method to generate myeloid lineage cells with proliferation capacity from induced pluripotent stem cells (iPSCs) (Zhang R. Cancer Immunol Res. 3: 668, 2015). In this study, we generated the GM-CSF-producing cells by genetic engineering of mouse iPSC-derived proliferation myeloid cells (iPSC-pMCs). Gene expression profiles revealed GM-CSF-transduced iPSC-pMCs (GM-pMCs) generated from C57BL/6 mice and 129Sv mice shared 180 up-regulated genes and 236 down-regulated genes compared with their corresponding iPSC-pMCs. Gene ontology analysis showed that the up-regulated gene signature shared by C57BL/6 GM-pMCs and 129Sv GM-pMCs was enriched for transcripts associate with cell cycle, cell cycle process, mitotic cell cycle and regulation of mitotic cell cycle.
 
Overall design Gene expression profiles of C57BL/6 iPSC-pMCs, GM-CSF-transuduced C57BL/6 iPSC-pMCs, GM-CSF-treated C57BL/6 iPSC-pMCs, 129Sv iPSC-pMCs, GM-CSF-transuduced 129Sv iPSC-pMCs, GM-CSF-treated 129Sv iPSC-pMCs
 
Contributor(s) Zhang R, Mahima H
Citation(s) 33457097
Submission date Sep 06, 2019
Last update date Jan 19, 2021
Contact name Minaho Kawamura
Organization name Rhelixa.Inc
Street address BLICK GATE Suidobashi F2, Chiyodaku-kandamisakicho
City Tokyo
ZIP/Postal code 101-0061
Country Japan
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (12)
GSM4065030 C57BL/6_pMC_1
GSM4065031 C57BL/6_pMC_2
GSM4065032 C57BL/6_GM-pMC_1
Relations
BioProject PRJNA564231
SRA SRP220635

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE136993_count_merged.tsv.gz 973.0 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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