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Series GSE13705 Query DataSets for GSE13705
Status Public on Nov 22, 2008
Title The effects of dietary curcumin on colonic gene expression in TNBS-induced colitis
Organism Mus musculus
Experiment type Expression profiling by array
Summary Curcumin is a potent anti-inflammatory compound capable of preventing chemically induced colitis in mice.
We used microarray analysis to detail the global programme of colonic gene expression in BALB/c mice fed standard or 2% curcumin-supplemented diet and treated with control or TNBS (trnitrobenzene-sulfonic acid, 2 mg/mouse) enema.

Keywords: Diet and disease effect.
 
Overall design 6-8 week old BALB/c mice were treated with respecive diet two days prior to enema administration (day 0) and sacrificed on day 7. Whole colon was dissected from mice and their wild-type littermates and total RNA isolated for microarray analysis using Affymetrix murine MOE430 mouse array set. RNA was pooled from 3 mice in each dietary/treatment group.
 
Contributor(s) Kiela PR
Citation(s) 18200517
Submission date Nov 21, 2008
Last update date Jan 08, 2019
Contact name Pawel R. Kiela
E-mail(s) pkiela@peds.arizona.edu
Phone 520-626-9687
Organization name University of Arizona
Department Pediatrics
Lab Gastroenterology and Nutrition
Street address 1501 N. Campbell Ave.
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platforms (2)
GPL339 [MOE430A] Affymetrix Mouse Expression 430A Array
GPL340 [MOE430B] Affymetrix Mouse Expression 430B Array
Samples (24)
GSM344602 BALB/c 1A
GSM344603 BALB/c 2A
GSM344604 BALB/c 3A
Relations
BioProject PRJNA109435

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13705_RAW.tar 84.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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