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Series GSE137827 Query DataSets for GSE137827
Status Public on Jul 06, 2020
Title RNA Sequencing Analysis of macrophages from Wild Type and Gsdmd-/- colitis mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We identified that GSDMD protected against DDS-induced colitis, and GSDMD deficiency in macrophages promoted the development of DSS-induced colitis.The purpose of this experiment was to identify how GSDMD protected against DSS-induced colitis.
 
Overall design Macrophages mRNA profiles of wild type (WT) and Gsdmd-/- mice with colitis were generated by deep sequencing, in triplicate, using BGISEQ-500
 
Contributor(s) Yang S, Ma C, Yang D
Citation(s) 32671214
Submission date Sep 23, 2019
Last update date Aug 18, 2020
Contact name Chunmei Ma
E-mail(s) macmzju@163.com
Phone 18857884378
Organization name Nanjing medical university
Street address 101 Longmian road,Nanjing
City Nanjing
ZIP/Postal code 211100
Country China
 
Platforms (1)
GPL23479 BGISEQ-500 (Mus musculus)
Samples (6)
GSM4089114 WT1
GSM4089115 WT2
GSM4089116 WT3
Relations
BioProject PRJNA573600
SRA SRP222937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137827_RAW.tar 1.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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