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Series GSE137959 Query DataSets for GSE137959
Status Public on Oct 01, 2020
Title Copy-Number abberation profiles of glioma patient tissue samples and corresponding xenografted tumor samples as well as cell lines derived there-of
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Genome variation profiling by array
Genome variation profiling by SNP array
Summary Three sample types are available: Primary patient samples after surgery that were flash-frozen and after short-term culture and after subsequent xenotransplantation into Nude rats or Nod/Scid, NSG or Nude mice. As well as longterm cell cultures derived from the xenotransplanted human tumors. Patient samples end with _B, mouse xenotransplanted tumors with_X and cell lines with_C. The preceeding numbers always indicate the patient association, whereas the following number inidcates mouse generation (X), passage number(C) or number of surgical samples (B) taken.
 
Overall design 69 Samples
 
Contributor(s) Niclou S, Hau A, Nicot N, Müller A, Golebiewska A, Stieber D
Citation(s) 33009951
Submission date Sep 24, 2019
Last update date Oct 05, 2020
Contact name Ann-Christin Hau
E-mail(s) ann-christin.hau@lns.etat.lu
Organization name Laboratoire National de sante
Department National Center of Pathology
Street address 1, Rue Louis Rech
City Luxembourg
ZIP/Postal code 3555
Country Luxembourg
 
Platforms (5)
GPL8736 Agilent-021529 Human CGH Whole Genome Microarray 1x1M (G4447A) (Feature Number version)
GPL9777 Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version)
GPL10152 Agilent-021924 SurePrint G3 Human CGH Microarray 8x60K (Feature Number version)
Samples (69)
GSM4095011 P13_patient_sample_1
GSM4095012 P13_cell-line_passage_9
GSM4095013 P13_Xenograft_Generation_2
Relations
BioProject PRJNA573953

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE137959_Matrix_Template_BED_positions_transformed_logratio.xlsx 15.2 Mb (ftp)(http) XLSX
GSE137959_RAW.tar 2.7 Gb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data are available on Series record

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