|
| Status |
Public on Feb 10, 2020 |
| Title |
Photoactivatable-Ribonucleotide-Enhanced Crosslinking and Immunoprecipitation (PAR-CLIP) of RNA-binding proteins (RBPs), IGF2BP1 and IGF2BP3 in the K562 CML-derived cell line |
| Organism |
Homo sapiens |
| Experiment type |
Other
|
| Summary |
Transcriptome-wide profiling of RNA-binding by IGF2BP1 and IGF2BP3 in the K562 cell line. Binding sites are characterized by T-to-C cross-linking mutations, depth and location on transcript
|
| |
|
| Overall design |
Two biological replicates of PAR-CLIP are provided each for IGF2BP1 and IGF2BP3
|
| |
|
| Contributor(s) |
Wong M, Chim B, Hafner M, Muljo SA |
| Citation(s) |
31768017 |
| Submission date |
Sep 26, 2019 |
| Last update date |
Feb 12, 2020 |
| Contact name |
Stefan A Muljo |
| E-mail(s) |
muljos@niaid.nih.gov
|
| Organization name |
NIH/NIAID
|
| Street address |
10 CENTER DR RM 11N306
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA574408 |
| SRA |
SRP223437 |
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