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Series GSE138177 Query DataSets for GSE138177
Status Public on Sep 21, 2020
Title Restoring chromatin accessibility for MLL reactivates latent tumor suppression-mediated vulnerability to proteasome inhibitors.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary MLL undergoes multiple distinct chromosomal translocations to yield aggressive leukemia with dismal outcomes. Besides their well-established role in leukemogenesis, MLL fusions also possess latent tumor suppressive activity which can be exploited as effective cancer treatment strategies using pharmacological means such as proteasome inhibitors (PIs). Here, we show that wild-type MLL is indispensable for the latent tumor suppressive activity of MLL fusions. MLL dysfunction, shown as loss of the chromatin accessibility and subsequent degradation of MLL, compromises the latent tumor suppressive activity of MLL fusions and is instrumental for the acquired PI resistance. Mechanistically, MLL dysfunction is caused by chronic PI treatment-induced epigenetic reprogramming and can be specifically restored by histone deacetylase (HDAC) inhibitors.
 
Overall design Examination of differential expressive genes in parental and resistant MLL leukemia cell lines SEM and RS4;11, and drug-resistant cells treated with DMSO or HDAC inhibitors (LBH589 and SAHA).
 
Contributor(s) Ge M, Liu H
Citation(s) 32733069
Submission date Sep 30, 2019
Last update date Sep 21, 2020
Contact name Maolin Ge
E-mail(s) MGE1@mgh.harvard.edu
Phone 8577578190
Organization name Harvard Medical School
Department MGH Cancer Center
Lab Bar-Peled
Street address 149 13th Street
City Charlestown
State/province Massachusetts
ZIP/Postal code 02129
Country USA
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (16)
GSM4101254 RS4;11_resistant_rep1
GSM4101255 RS4;11_resistant_rep2
GSM4101256 RS4;11_parental_rep1
Relations
BioProject PRJNA574987
SRA SRP223731

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138177_RS4_11_SEM_parental.fpkm.txt.gz 218.2 Kb (ftp)(http) TXT
GSE138177_RS4_11_SEM_parental_resistant.fpkm.txt.gz 4.4 Mb (ftp)(http) TXT
GSE138177_RS4_11_resistant_DMSO_LBH589_SAHA.fpkm.txt.gz 3.2 Mb (ftp)(http) TXT
GSE138177_SEM_resistant_DMSO_LBH589_SAHA.fpkm.txt.gz 152.4 Kb (ftp)(http) TXT
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Processed data are available on Series record

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