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Series GSE138467 Query DataSets for GSE138467
Status Public on Apr 17, 2020
Title Dynamics of the transcriptome response to heat in the moss, Physcomitrella Patens
Organism Physcomitrium patens
Experiment type Expression profiling by high throughput sequencing
Summary The moss Physcomitrella patens was employed to study abiotic stress responses in order to understand the effects of mild (30°C) and strong (37°C) continuous heat stresses from 1h to 24h at a transcriptomic level.
 
Overall design Identification of differentially expressed genes in heat treated samples (30 °C or 37°C) compared to controls (24 °C)
 
Contributor(s) Elzanati O, Bouzidi MF, Mouzeyar S, Roche J
Citation(s) 32098429
Submission date Oct 05, 2019
Last update date Apr 17, 2020
Contact name Said Mouzeyar
E-mail(s) said.mouzeyar@uca.fr
Organization name Université Clermont Auvergne
Department Biology
Lab UMR GDEC 1095 INRA-UCA
Street address 1 Impasse Amélie Murat
City Aubière
ZIP/Postal code 63178
Country France
 
Platforms (1)
GPL17793 Illumina HiSeq 2500 (Physcomitrella patens)
Samples (24)
GSM4109455 Control_1hr_Replicate1 [24_1_rep1]
GSM4109456 Control_1hr_Replicate2 [24_1_rep2]
GSM4109457 Control_6hr_Replicate1 [24_6_rep1]
Relations
BioProject PRJNA576004
SRA SRP224458

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138467_RAW.tar 2.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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