NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE13852 Query DataSets for GSE13852
Status Public on Aug 01, 2009
Title Expression profiling of Bos taurus lymph nodes upon infection with Ovine Herpesvirus 2
Organism Bos taurus
Experiment type Expression profiling by array
Summary We hypothesized that the relative abundances of host cell transcripts in lymph nodes of animals with malignant catarrhal fever (MCF), compared to healthy controls, may be used to identify pathways that may help to explain the pathogenesis of MCF. Therefore, an abundance of host cell gene expression patterns in lymph nodes of animals with MCF and healthy controls were analyzed by microarray. Indeed, a vast number of genes related to inflammatory processes, lymphocyte activation, cell proliferation and apoptosis were detected at different abundances. However, the IL-2 transcript was eminent among the transcripts, which were, compared to healthy controls, less abundant in animals with MCF. Compared to healthy cattle, bovines with MCF appear to mimic an IL-2 knockout phenotype that has been described in mice. This supports the hypothesis that immunopathogenic events are linked to the pathogenesis of MCF. IL-2-deficiency may play an important role in the process.

Keywords: disease state analysis
 
Overall design Comparison of lymph node samples from 3 infected animals with lymph node samples from 6 uninfected animals.
 
Contributor(s) Meier-Trummer CS, Rehrauer H, Patrignani A, Wagner U, Ackermann M
Citation(s) 19603070
Submission date Dec 05, 2008
Last update date Dec 17, 2012
Contact name Hubert Rehrauer
E-mail(s) Hubert.Rehrauer@fgcz.ethz.ch
Organization name ETH Zurich / University of Zurich
Department FGCZ
Street address Winterthurerstr. 190
City Zurich
ZIP/Postal code 8057
Country Switzerland
 
Platforms (1)
GPL2112 [Bovine] Affymetrix Bovine Genome Array
Samples (9)
GSM348251 Lymph nodes_Infected_R:01
GSM348252 Lymph nodes_Infected_R:02
GSM348253 Lymph nodes_Infected_R:03
This SubSeries is part of SuperSeries:
GSE13854 Expression profiling of the host and the Ovine Herpesvirus 2 pathogen during malignant catarrhal fever of cattle
Relations
BioProject PRJNA114591

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13852_RAW.tar 30.4 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap