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Series GSE138666 Query DataSets for GSE138666
Status Public on Apr 04, 2021
Title TSPO ameliorated the liver fibrosis in non-alcoholic fatty liver disease mice
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary The 18-kDa translocator protein TSPO is a conserved ubiquitous high affinity cholesterol binding protein localized in the outer mitochondrial membrane. It plays a critical role in the segregation and transport of cholesterol from the outer to the inner mitochondrial membrane in steroidogenic cells. Imaging studies in humans, using specific TSPO ligands, showed that TSPO is highly expressed and accurately mirrors the histological picture of non-alcoholic fatty liver disease (NAFLD)/nonalcoholic steatohepatitis (NASH). However, the functions of TSPO in simple steatosis (SS) and NASH are unknown. In the present study, we examined the TSPO functions with in vivo NAFLD model. To induce NASH in vivo, we fed the WT and TSPO KO rat with MCD (methionine-choline deficient) diet. Loss of TSPO ameliorated the liver fibrosis through down regulation of bile acid synthesis by reduction of CYP7A1 and CYP27A1 and increase of farnesoid X receptor (FXR).
 
Overall design To induce NASH in vivo, we fed the WT and TSPO KO rat with MCD (methionine-choline deficient) diet.
 
Contributor(s) Li Y, Li L, Sottas CM, Papadopoulos V
Citation(s) 34013171
Submission date Oct 09, 2019
Last update date May 25, 2021
Contact name Lu Li
E-mail(s) greenpearll0804@gmail.com
Phone 323-442-0277
Organization name University of Southern California
Department School of Pharmacy
Street address Room 706, 1985 Zonal Ave
City Los Angeles
State/province CA
ZIP/Postal code 90089
Country USA
 
Platforms (1)
GPL23945 Illumina HiSeq 3000 (Rattus norvegicus)
Samples (16)
GSM4115826 WT-CHOW rep1
GSM4115827 WT-CHOW rep2
GSM4115828 WT-CHOW rep3
Relations
BioProject PRJNA576699
SRA SRP224984

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE138666_TMM_normalized_reads_count_per_million.txt.gz 1.5 Mb (ftp)(http) TXT
GSE138666_rsem_count.txt.gz 481.1 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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