|
| Status |
Public on Sep 01, 2020 |
| Title |
Comparison of bioprinted kidney organoids in different conformations |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Bulk RNA-seq comparison of kidney organoids bioprinted in 3 different conformations with varying starting cell densities. Density is dictated by the ratio of bioprinter tip movement to the amount of extrusion, where higher ratios spread cells over a larger surface area. We compare organoids printed with no movement ('blob', ratio 0) to those with moderate ('line 3', ratio 20) or high movement ('line 1', ratio 40).
|
| |
|
| Overall design |
Each condition consistes of 3 replicate organoids, where each replicate was generated from a distinct well of differentiated iPSCs.
|
| Web link |
https://github.com/KidneyRegeneration/BioprintedOrganoids
|
| |
|
| Contributor(s) |
Lawlor KT, Vanslambrouck JM, Little MH |
| Citation(s) |
33230326 |
| Submission date |
Oct 10, 2019 |
| Last update date |
Mar 30, 2022 |
| Contact name |
Kynan Thomas Lawlor |
| E-mail(s) |
kynan.lawlor@mcri.edu.au
|
| Organization name |
Murdoch Children's Research Institute
|
| Street address |
Murdoch Children's Research Institute, Flemington Road
|
| City |
Parkville |
| State/province |
VIC |
| ZIP/Postal code |
3052 |
| Country |
Australia |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (9)
|
|
| Relations |
| BioProject |
PRJNA576921 |
| SRA |
SRP225115 |
Less...
More...