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Series GSE13922 Query DataSets for GSE13922
Status Public on Feb 01, 2009
Title The effects of Mycophenolate treatment on the transcriptomes of patients with symptomatic carotid artery stenosis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary This study was conducted in order to assess the effects of the compound Mycophenolate mofetil (MMF), an inhibitor of the enzyme inosine monophosphate dehydroxygenase (IMPDH) with a strong cytostatic effect on T-cells, on the phenotype of human carotid artery stenosis in humans in vivo. This was done at the transcriptome level by comparing the gene expression profiles of carotid endarterectomy samples from patients with carotid artery stenosis (>70% diameter stenosis on angiography) that were randomly assigned to treatment with MMF 1000 mg (N=9) or Placebo (N=11), respectively. MMF or placebo was given for at least 2 weeks prior to undergoing carotid endarterectomy (CEA).
 
Overall design Patients and study personnel were blinded to study group assignments. The institutional ethics committee approved the study, and informed consent was obtained prior to enrollment. This study is registered as an International Standardised Randomised Controlled Trial, number ISRCTN84092396.
The transcriptomes were determined by means of hybridizing one round amplified and biotinylated cRNA molecules, extracted from the carotid endarterectomy samples, on Sentrix Illumina Human Ref-8 version2.0 gene expression chips.
 
Contributor(s) van Leuven SI, Volger OL, van Wijk DF, de Vries J, de Kleijn DV, van der Loos CM, Horrevoets AJ, van der Wal AC, de Boer OJ, Pasterkamp G, Hayden MR, Kastelein JJ, Stroes ES
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Submission date Dec 12, 2008
Last update date Mar 20, 2012
Contact name Oscar Leonard Volger
E-mail(s) Stephan.schirmer@uks.eu, a.m.vanderLaan@amc.uva.nl
Organization name Academic Medical Center
Department Cardiology
Street address Meibergdreef 15
City Amsterdam
State/province Noor Holland
ZIP/Postal code 1105 AZ
Country Netherlands
 
Platforms (1)
GPL6255 Illumina humanRef-8 v2.0 expression beadchip
Samples (20)
GSM350636 860_Placebo
GSM350637 917_Placebo
GSM350638 1297_Placebo
Relations
BioProject PRJNA110249

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13922_RAW.tar 5.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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