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Series GSE139235 Query DataSets for GSE139235
Status Public on Aug 11, 2021
Title Tumor-derived Schwann-like cells promote neuroblastoma survival through secreted trophic factors
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Neuroblastoma (NB) is comprised of a mixture of neuroblastic N-type cancer cells, and Schwannian stromal S-type cells. Sublines of N- and S-type cells were isolated from an early passage of SK-N-SH NB cell line. RNA-Seq analysis was conducted on slected N- and S-type cells in order to define their unique expression profiles.
 
Overall design An N-type cell line, NC3; and an S-type cell line, S3, was selected. RNA was extracted in duplicate and subjected to RNA-Sequencing analysis.
 
Contributor(s) Li J, Chan AM
Citation(s) 33932101
Submission date Oct 22, 2019
Last update date Aug 12, 2021
Contact name Andrew M. Chan
E-mail(s) andrewmchan@cuhk.edu.hk
Phone 39433771
Organization name The Chinese University of Hong Kong
Department School of Biomedical Science
Street address Room 407, 4/F, Lo Kwee-Seong Integrated Biomedical Sciences Building,, Area 39, The Chinese University of Hong Kong
City Hong Kong
State/province NA
ZIP/Postal code NA
Country Hong Kong
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (4)
GSM4134439 NC3_1
GSM4134440 NC3_2
GSM4134441 S3_1
Relations
BioProject PRJNA578860
SRA SRP226582

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139235_RAW.tar 14.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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