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Series GSE139578 Query DataSets for GSE139578
Status Public on Dec 31, 2020
Title miRNA sequencing profile of isolated Kit+ interstital cells of Cajal (ICC) in Leptin mutant mice
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We report the high-throughput miRNA sequencing of isolated colonic and jejunal Kit+ interstitial cells of Cajal (ICC) from Lepob/ob;KitcopGFP mice, which develop type 2 diabetes, and Lepob/+;KitcopGFP mice which are non-diabetic counterparts and control
 
Overall design Global transcriptomic profiling of miRNA produced in isolated ICC
 
Contributor(s) Ro S, Park C
Citation(s) 33421511
Submission date Oct 29, 2019
Last update date Apr 01, 2021
Contact name Seungil Ro
E-mail(s) sro@med.unr.edu
Phone 775-409-6007
Organization name University of Nevada, Reno
Department Physiology & Cell Biology
Lab Center for Molecular Medicine, L-206
Street address 1664 N Virginia St
City Reno
State/province NV
ZIP/Postal code 89557
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM4143932 Mouse healthy jejunal ICC: Lepob/+;KitcopGFP/+
GSM4143933 Mouse diabetic jejunal ICC: Lepob/ob;KitcopGFP/+
GSM4143934 Mouse healthy colonic ICC: Lepob/+;KitcopGFP/+
Relations
BioProject PRJNA580291
SRA SRP227389

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE139578_Kit+_ICC_miRNA_sequencing_analysis.xls.gz 920.4 Kb (ftp)(http) XLS
GSE139578_Kit+_ICC_miRNA_sequencing_reads.xls.gz 875.2 Kb (ftp)(http) XLS
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Raw data are available in SRA
Processed data are available on Series record

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