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Series GSE141065 Query DataSets for GSE141065
Status Public on Nov 05, 2020
Title Epigenome analysis of cord blood DNA from infants born into the UPBEAT study
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome-wide DNA methylation profiling of umbilical cord blood buffy coat DNA samples. The Illumina Infinium MethylationEPIC array was used to obtain DNA methylation profiles across approximately 850,000 CpGs. Samples included 557 cord blood samples born to obese women in the UPBEAT trial, with and without gestational diabetes mellitus (GDM), to determine the association between maternal GDM and hyperglycaemia during pregnancy on the methylation in the infant.
 
Overall design Bisulphite converted DNA from the 557 samples were hybridised to the Illumina Human Infinium MethylationEPIC array.
 
Contributor(s) Antoun E
Citation(s) 33151971, 33784941
Submission date Nov 26, 2019
Last update date Apr 19, 2022
Contact name Elie Antoun
Organization name University of Oxford
Department CAMS China Oxford Institute (CAMS-COI
Street address Nuffield Department of Medicine
City Oxford
State/province United Kingdom
ZIP/Postal code OX3 7BN
Country United Kingdom
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (557)
GSM4193880 Genomic DNA from umbilical cord blood buffycoat 1
GSM4193881 Genomic DNA from umbilical cord blood buffycoat 2
GSM4193882 Genomic DNA from umbilical cord blood buffycoat 3
Relations
BioProject PRJNA591916

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE141065_Beta_for_GEO.txt.gz 3.1 Gb (ftp)(http) TXT
GSE141065_RAW.tar 7.8 Gb (http)(custom) TAR (of IDAT)
Processed data are available on Series record
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