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Status |
Public on Feb 23, 2021 |
Title |
The Fusobacterium Nucleatum (Fn) in colorectal carcinogenesis |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
To elucidate whether Fusobacterium Nucleatum(Fn) plays a role in colorectal cancer tumorigenesis, a RNA-seq analysis was performed to compare the gene expression profiles of Fn treated HCT116 colorectal cancer cell lines.
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Overall design |
RNA-seq was performed in HCT116 colorectal cancer cells after Fusobacterium Nucleatum treatment.
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Contributor(s) |
Lu S |
Citation(s) |
33318144 |
Submission date |
Dec 11, 2019 |
Last update date |
Feb 23, 2021 |
Contact name |
Haoyan Chen |
Organization name |
Renji Hospital
|
Street address |
145 Shandong Road
|
City |
Shanghai |
State/province |
Shanghai |
ZIP/Postal code |
200001 |
Country |
China |
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Platforms (1) |
GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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Samples (6)
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GSM4213584 |
HCT116 Cell line treated by Fn replicate 1 |
GSM4213585 |
HCT116 Cell line treated by Fn replicate 2 |
GSM4213586 |
HCT116 Cell line treated by Fn replicate 3 |
GSM4213587 |
HCT116 Cell line normal control replicate 1 |
GSM4213588 |
HCT116 Cell line normal control replicate 2 |
GSM4213589 |
HCT116 Cell line normal control replicate 3 |
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Relations |
BioProject |
PRJNA594850 |
SRA |
SRP236877 |