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Series GSE142866 Query DataSets for GSE142866
Status Public on Feb 24, 2020
Title Ethyl acetate fraction of Lentinula edodes (LEA) inhibits osteoclastogenesis by suppressing NFATc1 expression
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To screen for altered gene expression during osteoclastogenesis, BMM cells treated with RANKL or RANKL+LEA were subjected to gene expression profiling.
 
Overall design Transcriptome profiles of RANKL- or RANKL+LEA-treated BMMswere generated by deep sequencing, in duplicate, using HiSeq 2500.
 
Contributor(s) Kim K
Citation(s) 32079267
Submission date Jan 02, 2020
Last update date Feb 24, 2020
Contact name Kyunghwan Kim
E-mail(s) kyungkim@chungbuk.ac.kr
Organization name Chungbuk National University
Street address Rm #202a, Bldg. S1-5, 1 chungdae-ro
City Cheongju
ZIP/Postal code 28644
Country South Korea
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM4246812 No RANKL_C1_rep1
GSM4246813 No RANKL_C2_rep2
GSM4246814 RANKL_R1_rep1
Relations
BioProject PRJNA598711
SRA SRP239322

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE142866_rpkm_mushroom.xlsx 2.7 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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