|
| Status |
Public on May 11, 2020 |
| Title |
Heterochromatin-driven nuclear softening protects the genome against mechanical stress-induced damage |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
RNA and H3K9me3 ChIP sequencing data of normal human neonatal keratinocytes subjected to 40% uniaxial cyclic stretch
|
| |
|
| Overall design |
Total RNA from 3 biological replicates of control cells and cells stretched for 30 and 360 minutes. Paired-end sequencing 100bp reads HiSeq2000. H3K9me3 chromatin immunoprecipitation paired-end 100 bp reads NovaSeq6000
|
| |
|
| Contributor(s) |
Wickström S |
| Citation(s) |
32302590 |
| Submission date |
Jan 13, 2020 |
| Last update date |
May 11, 2020 |
| Contact name |
Sara A Wickström |
| E-mail(s) |
sara.wickstrom@helsinki.fi
|
| Organization name |
University of Helsinki
|
| Street address |
Haartmaninkatu 8
|
| City |
Helsinki |
| ZIP/Postal code |
00290 |
| Country |
Finland |
| |
|
| Platforms (2) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (17)
|
|
| Relations |
| BioProject |
PRJNA600874 |
| SRA |
SRP241704 |
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