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Series GSE14407 Query DataSets for GSE14407
Status Public on Dec 31, 2009
Title Ovarian Cancer gene expression profiling identifies the surface of the ovary as a stem cell niche
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In contrast to epithelial derived carcinomas that arise in most human organs, ovarian surface epithelial cells become more rather than less differentiated as the malignancy progresses. To test the hypothesis that ovarian surface epithelial cells retain properties of relatively uncommitted pluripotent cells until undergoing neoplastic transformation, we conducted gene expression profiling analysis (Affymetrix, U133 Plus 2.0) of 12 ovarian surface epithelial cells and 12 laser capture microdissected serous papillary ovarian cances. We find that over 2000 genes are significantly differentially expressed between the surface epithelial and cancer samples. Network analysis implicates key signaling pathways and pathway interactions in ovarian cancer development. Genes previously associated with adult stem cell maintenance are expressed in ovarian surface epithelial cells and significantly down-regulated in ovarian cancer cells. Our results indicate that the surface of the ovary is an adult stem cell niche and that deregulation of genes involved in maintaining the quiescence of ovarian surface epithelial cells is instrumental in the initiation and development of ovarian cancer.
 
Overall design Twelve healthy ovarian surface epithelia samples (OSE) were compared to twelve laser capture microdissected serous ovarian cancer epithelia samples (CEPI) via Affymetrix 3' expression array.
 
Contributor(s) Bowen NJ, Walker LD, Matyunina LV, Totten K, Benigno BB, McDonald JF
Citation(s) 20040092
Submission date Jan 13, 2009
Last update date Mar 25, 2019
Contact name Nathan J. Bowen
E-mail(s) nbowen@cau.edu
Phone 4048808158
Organization name Clark Atlanta University
Department Center for Cancer Research and Therapeutic Development
Lab Cancer Development and Evolution
Street address 223 James P Brawley Drive
City Atlanta
State/province GA
ZIP/Postal code 30314
Country USA
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (24)
GSM359972 OSE_434
GSM359973 OSE_541
GSM359974 OSE_437
Relations
BioProject PRJNA111799

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE14407_RAW.tar 133.0 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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