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Series GSE144372 Query DataSets for GSE144372
Status Public on Apr 07, 2021
Title Cancer-associated exportin-6 upregulation inhibits the transcriptional repressive and anticancer effects of nuclear profilin-1
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Aberrant expression of nuclear transporters and altered subcellular localization of their cargo proteins are increasingly recognized as drivers and therapeutic targets of cancer. Here, we report that exportin-6, a nuclear exporter specific for actin/profilin-1, is upregulated in a broad range of cancers and associated with poor prognosis. Exportin-6 loss triggers antitumor effects in breast cancer cells in a profilin-1-dependent fashion. Nuclear profilin-1 interacts with the Super Elongation Complex (SEC), a positive transcriptional regulator of pro-cancer genes including MYC. Exportin-6 loss, by increasing nuclear profilin-1, inhibits SEC-dependent transcription and sensitizes breast cancer cells to inhibition of BET domain proteins. Thus, exportin-6 upregulation is a previously unrecognized cancer addiction that reduces the transcriptional inhibitory and anticancer activities of nuclear profilin-1.
 
Overall design Duplicate results of RNA-seq using breast cancer MCF-7 cell line stably expressing exportin-6 (wild type or RNAi-resistant) and infected with shRNAs targeting firefly luciferase or exportin-6.
 
Contributor(s) Shao J, Mooradian A
Citation(s) 33596420
Submission date Jan 28, 2020
Last update date Apr 07, 2021
Contact name Jieya Shao
Organization name Washington University in St. Louis
Street address 660 South Euclid Ave
City Saint Louis
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (8)
GSM4286977 XPO6(WT)_shLUC_rep1
GSM4286978 XPO6(WT)_shLUC_rep2
GSM4286979 XPO6(WT)_shXPO6_rep1
Relations
BioProject PRJNA603508
SRA SRP245599

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Supplementary file Size Download File type/resource
GSE144372_RAW.tar 22.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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