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Series GSE144487 Query DataSets for GSE144487
Status Public on Mar 25, 2020
Title Analysis of DNA methylation-based tumor immune microenvironment patterns in metastatic melanoma
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary We subjected 196 melanoma tumors to genome-wide methylation analysis using the Illumina Infinium MethylationEPIC BeadChip array.
 
Overall design Bisulphite converted DNA from 196 melanoma tumors were hybridized using Illumina Infinium MethylationEPIC BeadChip array
 
Contributor(s) Mitra S, Lauss M, Jönsson GB
Citation(s) 32147909, 36040798
Submission date Jan 29, 2020
Last update date Dec 08, 2022
Contact name Göran B Jönsson
E-mail(s) goran_b.jonsson@med.lu.se
Organization name Lund University
Department Clinical Sciences
Lab Melanoma Genomics
Street address Scheelevägen 2
City Lund
ZIP/Postal code 22281
Country Sweden
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (196)
GSM4289057 200930770095_R01C01: genomic DNA from Sample Tum1
GSM4289058 200930770095_R02C01: genomic DNA from Sample Tum2
GSM4289059 200930770095_R03C01: genomic DNA from Sample Tum3
Relations
BioProject PRJNA603777

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144487_RAW.tar 161.2 Mb (http)(custom) TAR
GSE144487_Tumor_beta_normalized.txt.gz 1.2 Gb (ftp)(http) TXT
GSE144487_Tumor_beta_raw.txt.gz 1.2 Gb (ftp)(http) TXT
GSE144487_Tumor_metadata.xlsx 16.2 Kb (ftp)(http) XLSX
Processed data are available on Series record
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