NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE144643 Query DataSets for GSE144643
Status Public on Apr 19, 2021
Title A phase separation mechanism underlies development of cancer and aberrant organization of three-dimensional chromatin structure
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34163069
Submission date Feb 01, 2020
Last update date Oct 01, 2021
Contact name Gang Greg Wang
E-mail(s) greg_wang@med.unc.edu
Phone 919-9665952
Organization name UNC Lineberger Comprehensive Cancer Center
Department Dept of Biochemistry and Biophysics
Lab gregwanglab
Street address 450 West Drive
City Chapel Hill
State/province NC
ZIP/Postal code 27599-7295
Country USA
 
Platforms (4)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL21626 NextSeq 550 (Mus musculus)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (56)
GSM4259896 HEK_HiC_NUP_IDR_WT_A9_1.1
GSM4259897 HEK_HiC_NUP_IDR_WT_A9_1.2
GSM4259898 HEK_HiC_NUP_IDR_WT_A9_2.1
This SuperSeries is composed of the following SubSeries:
GSE143465 A phase separation mechanism underscores development of cancer and aberrant organization of three-dimensional chromatin structure [Hi-C]
GSE144076 Phase separation drives aberrant chromatin looping and cancer development [ChIP-Seq]
GSE144642 Phase separation drives aberrant chromatin looping and cancer development [RNA-Seq]
Relations
BioProject PRJNA604379

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE144643_RAW.tar 62.0 Gb (http)(custom) TAR (of HIC)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap