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Series GSE147871 Query DataSets for GSE147871
Status Public on Feb 21, 2021
Title Naked mole rat cells are protected from cellular senescence via Wnt/β-catenin-promoted cholesterol metabolism
Organism Heterocephalus glaber
Experiment type Expression profiling by high throughput sequencing
Summary The naked mole rat (NMR; Heterocephalus glaber) exhibits cancer resistance and an exceptionally long lifespan of approximately 30 years. The longevity of the NMR is widely debated, as it poses challenges to theories associated with aging, cancer, and redox homeostasis. In the present study, we report unique mechanisms of cholesterol metabolism in NMR cells that could be responsible in part for their anti-senescent properties. We found that NMR fibroblasts abundantly express β-catenin, and that increased β-catenin activity is linked to increased accumulation of cholesterol-enriched lipid droplets. Either β-catenin knockdown or inhibition of cholesterol synthesis abolished lipid droplet formation, and enhanced induction of senescence-like phenotypes. Analysis of β-catenin-regulated genes revealed that β-catenin upregulated the LXR/RXR pathway and Apolipoprotein F, which are involved in cholesterol biogenesis and transport. Specifically, Apolipoprotein F is involved in the accumulation of lipid droplets, protecting NMR cells from cellular senescence. We thus suggest that increased β-catenin activity evolved in NMRs to offset senescence via the accumulation of cholesterol-enriched lipid droplets. Hence, the anti-senescence effects of the Wnt/β-catenin signaling in NMRs reveals new strategies for the development of anti-cancer and anti-aging treatments.
 
Overall design To determine the mechanisms by which β-catenin induced accumulation of cholesterol-enriched lipid droplets, we performed comparative RNA-seq analysis of control and β-catenin knockdown NSFs (Naked mole rats skin fibroblasts).
 
Contributor(s) Chee W, Daisuke O, Okada M
Citation(s) 33742113
Submission date Apr 01, 2020
Last update date Mar 21, 2021
Contact name Daisuke Okuzaki
E-mail(s) dokuzaki@biken.osaka-u.ac.jp
Phone +81-6-6879-4935
Organization name Osaka univ.
Department Immunology Frontier Research Center
Lab Human Immunology (Single Cell Genomics)
Street address Yamadaoka 3-1
City Suita
State/province Osaka
ZIP/Postal code 565-0871
Country Japan
 
Platforms (1)
GPL21195 Illumina HiSeq 2500 (Heterocephalus glaber)
Samples (2)
GSM4447491 β-catenin-knockdown NSFs
GSM4447492 control-knockdown NSFs
Relations
BioProject PRJNA622445
SRA SRP254888

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147871_RAW.tar 470.0 Kb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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