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Series GSE149706 Query DataSets for GSE149706
Status Public on Oct 01, 2020
Title Werner Helicase Prevents Cell Death in Cancers with Microsatellite Instability (END-Seq)
Organism Homo sapiens
Experiment type Other
Summary Our study uncovers a distinct biomarker for MSI that underlies the synthetic lethal dependence on WRN, thereby supporting the development of WRN-based therapeutics
 
Overall design ENDseq was performed under different experimental condition in MSI and MSS cells to uncovers sites of recurrent DNA damage genome-wide
 
Contributor(s) Van Wietmarschen N, Sridharan S, Nussenzweig A
Citation(s) 32999459
Submission date May 01, 2020
Last update date Feb 17, 2021
Contact name Andre Nussenzweig
E-mail(s) nussenza@mail.nih.gov
Organization name National Institutes of Health
Department National Cancer Institute
Lab Laboratory of Genome Integrity
Street address 9000 Rockville Pike, Building 37
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (34)
GSM4509216 ENDseq-KM12-DOX-rep1
GSM4509217 ENDseq-KM12-NT-rep1
GSM4509218 ENDseq-KM12-DOX-rep2
This SubSeries is part of SuperSeries:
GSE149709 Werner Helicase Prevents Cell Death in Cancers with Microsatellite Instability
Relations
BioProject PRJNA629785
SRA SRP259921

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE149706_RAW.tar 3.9 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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